CDS

Accession Number TCMCG006C99205
gbkey CDS
Protein Id XP_013669288.2
Location complement(join(23654795..23655073,23655150..23655396,23655547..23655779,23655865..23656006,23656056..23656185,23656265..23656547,23656635..23656758,23656859..23657109,23657242..23657349,23657571..23657675,23658042..23658380,23659407..23659897,23659972..23660608,23660988..23661050))
Gene LOC106373695
GeneID 106373695
Organism Brassica napus

Protein

Length 1143aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013813834.2
Definition DExH-box ATP-dependent RNA helicase DExH9-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description rRNA-processing arch domain
KEGG_TC -
KEGG_Module M00393        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12598        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000460        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031125        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGAAGATCCACTTGCATGACACAGCTCTCTTCCCCTTAGGCAACTCACTCTCATACCATGAGAATCTGAGCCTTGATCTTCTAGACCTCCAGCTTCTTCTGATACTTCTTCTGAGCCTTGATCTTTTAACCCTTCAGCTTCAGATTCACTCAAGTTCTACAAATGGGTCTCAAAACACTGTTCTTGGATCTGAGGCTACAGTCAGATTTGGAACTACTGCTACTGCTCAAACACAGCAACAAACAAATACCCTGCTGATAGACCCGTCAGTCACCACCCGGGAAAATCTCACTGCTCTCCCTCCTAAGGAAAGTACCCCAATCCAAACTAACACTGCCTCGGGTTCTCACCCAGCCCCGCCTTATCGTCATATGCCTGATCCCACCCTGGTGGAAAGACTCCGAACCAAAGAGGATAAATCATTGCAACGATTAGCGCCAGTTACTATATCAGCAACTAGAAGACCTAGAGTGCTTATTCCCGATGCTGTTTTTCAGAAAGGCGCTGAGATGCACAAGGACTTCAATTCGTCATCTGTTACTTTAACGACACCCTTCACACAAATCCAAAGCGTACTCAATCATATGTGGGGTAAAGGAAGAAAACTTAAAATTCATAACAATCCCTTACACAGGTCTGCTATTGTGAGGATTACTAGTGATTACCTCAGAGGGAAGATCCTAGAGAAAACATCTGCCATAAAGATTTGGGCTCACCTTACTGGCGTCCCGCTTGACCTAAGACACAAAGAGGGTCTGAGTTTGGTTGCTGGCTTGGTTGGTCACCCAAAGGAAACAGATGATTTCACACTGAATCTTGTCAGTCTTATTCTATCTCACGTAAAGGTGGAAGTCGACCTAACCGAACCTCTTCCCAGTGTTGTTGAATTTGAAAGAGAAAGTGGAGAAGTGGTTGAGGTTCAAGTCGATTACCCTTGGGTTCCTCCTACCTACTCTCACTGCAAGGAGTTGGGACACATTGTGAGAAACTGCCTCTCATATACTCCACCCCCTAAAGAAACCGCAAAGAAAGCCCCTGCCCCCAAAAAACCCACAAAATCTCAACATGTAGCATCTAGGAGTCTCCCTATCCCTGCAATGGCGGAAAATAAGAATAAGGAGTCTGTAGCTGGCTCATCTTCTGTCTTACCTTCCACTAGAAGCCTTCCCACTCAAGAAATTCCCCTTGTTCACAAACAACCATGCCATATTGTTTACACCGATTATCGGCCAACTCCGCTTCAGCACTATGTCTTTCCTGCCGGAGGGAGTGGCCTTTACTTGGTTGTGGATGAAAAGGCTAAATTCCATGAAGATAGCTTTCAAAAATCTCTTAACGCACTCGTTCCTGCTAATGATGGTGACAAGAAAAGAGAAAATGGGAAATCTCAAAAGGGCTTGATACTTGGAAAACTTGGTGAAGAAAGTGATATCTTCAAATTGGTGAAAATGATTATTCAGCGCCAGTATGATCCCGTGATTTTGTTCAGTTTCAGCAAAAAGGAATGCGAGGCACTTGCTATGCAGATGTCTAAGATGGATTTAAACAGCGACGATGAGAAAGACTCCGTGGAGACAATCTTTACTAGTGCCATCGATATGCTTTCAGATGATGATAAGAAGCTACCTCAGGTGTCAAATATTTTACCCATCTTAAAACGTGGTATCGGCGTTCATCATTCGGGCTTGCTTCCAATTTTGAAAGAAGTAATTGAGATATTATTTCAAGGTCTGATTAAGTGTTTGTTTGCAACAGAGACATTTAGTATTGGATTGAACATGCCAGCAAAGACGGTTGTGTTTACAAATGTACGCAAGTTTGATGGAGACAAGTTCCGGTGGCTATCTAGTGGAGAGTACATTCAAATGAGTGGTCGCGCTGGACGTCGAGGTGTTGACAAACGAGGTATCTGCATCCTCATGGTGGATGAGAAAATGGAACCCGCTGTTGCTAAATCAATGCTCAAAGGAAGTGCTGATTCTTTGAACAGTGCCTTCCATTTGAGCTATAACATGCTTCTAAATCAGTTGCGGAGTGAAGATGGTGATCCTGAGAATCTTCTTAGCAATTCTTTCTTTCAGTTTCAAGCTGACCGTGCTATCCCGGATATCGAGAAGCAAATAAAAGCCCTGCAAGAAGAGAGAGACTCTATGGTTATTGAAGAAGAAGAAAGCTTAAGGAATTACTATAACCTGATTTTGCAGTATAAGAGCCTGAAGGAGGATATACGTGAAATTGTGTTCTCTCCGAAGTACTGTTTACCCTTTTTGCTGCCGAACAGAGCTGTTTGTCTCGATTGCCCAAGTGATAATGGAGAGCAACAATCATTCAGCATTGAAGACCAGGATGCGTGGGGAGTGATAATGAAATTCAACAAAGTCAAAAGCTTATCTGAAGAAATTCTTACCGTAGATGTACTGACCAGATGTTTGGTCAGCAGAGATGGCGCTGGCAAAAAGAAAATTAAACCTGTGCCATTTAAGGAACGTGGTGAGCCCGTTGTCGTCTCTGTACCTTTATCTCAGGTTAAGAGTTTAAGCAGTGCAATTATGAATATACCTAAAGACTATTTACAATTGGAAGCTCGAGAGAATGCTCTGAAGAAGGTTTCTGAATTACTCTCGAGACATCCTGATGGAATACCCCTGGATCCTGAAGTTGATATGAAGATTCGGATCAGCTCTTACAAAAAGACAGTTCGTCGGCTGGAGGCTCTTGAAAACCTATTTGAAAAACACAAAATTGCAAAATCTCCTCTGATAGCGCAGAAGCTGAAAGTTCTACACATGAAGGAAGAGCTAACAGCCAAGATCAAATCACTTGAGAAAACTGTCCGATCTTCAACAGCATTGGCGTTTAAAGATGAACTTAAGGCCAGAAAGCGTGTTTTGCGAAGGCTAGGATACATCACAAGCGACAATGTTGTGGAGTTGAAGGGAAAGGTTGCATGTGAAATCAGTAGTGCAGAAGAATTGACATTAACGGAGCTAATGTTCAGTGGTGTCTTCAAGGAAGCAAAGGTGGAGGAGCTGGTTTCTCTCCTCTCTTGCTTTGTGTGGCGAGAGAGGCTCCCTGACGCAGCTAAACCCAGAGAAGAACTCGACTTACTCTTCATACAGTTACAAGATACAGACAGGCGTGCTGCTGAAGTCGATATCGACGTAGAGAGTTTTGTGCATTCGTTCAGACCGGATATAATGGTGGCGGTGTATGCGTGGGCAAAAGGCTCCAAGTTTTACGAGATCATGGAGATTGCTCGTGTTTTCGAAGGGAGCTTGATCAGAGCGATAAGGAGAATGGAGGAAGTTCTACAACAGCTCATCGTAGCTGCAAAATCCATAGGTGAAACACAGCTTGAGGCTAAACTTGAAGAAGCTGTTTCCAAGATCAAGAGAGACATTGTGTTCGCTGCATCTCTCTACTTGTGA
Protein:  
MVKIHLHDTALFPLGNSLSYHENLSLDLLDLQLLLILLLSLDLLTLQLQIHSSSTNGSQNTVLGSEATVRFGTTATAQTQQQTNTLLIDPSVTTRENLTALPPKESTPIQTNTASGSHPAPPYRHMPDPTLVERLRTKEDKSLQRLAPVTISATRRPRVLIPDAVFQKGAEMHKDFNSSSVTLTTPFTQIQSVLNHMWGKGRKLKIHNNPLHRSAIVRITSDYLRGKILEKTSAIKIWAHLTGVPLDLRHKEGLSLVAGLVGHPKETDDFTLNLVSLILSHVKVEVDLTEPLPSVVEFERESGEVVEVQVDYPWVPPTYSHCKELGHIVRNCLSYTPPPKETAKKAPAPKKPTKSQHVASRSLPIPAMAENKNKESVAGSSSVLPSTRSLPTQEIPLVHKQPCHIVYTDYRPTPLQHYVFPAGGSGLYLVVDEKAKFHEDSFQKSLNALVPANDGDKKRENGKSQKGLILGKLGEESDIFKLVKMIIQRQYDPVILFSFSKKECEALAMQMSKMDLNSDDEKDSVETIFTSAIDMLSDDDKKLPQVSNILPILKRGIGVHHSGLLPILKEVIEILFQGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGVDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQLRSEDGDPENLLSNSFFQFQADRAIPDIEKQIKALQEERDSMVIEEEESLRNYYNLILQYKSLKEDIREIVFSPKYCLPFLLPNRAVCLDCPSDNGEQQSFSIEDQDAWGVIMKFNKVKSLSEEILTVDVLTRCLVSRDGAGKKKIKPVPFKERGEPVVVSVPLSQVKSLSSAIMNIPKDYLQLEARENALKKVSELLSRHPDGIPLDPEVDMKIRISSYKKTVRRLEALENLFEKHKIAKSPLIAQKLKVLHMKEELTAKIKSLEKTVRSSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGVFKEAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTDRRAAEVDIDVESFVHSFRPDIMVAVYAWAKGSKFYEIMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL